PP_00317LF.2

Display Name: Spain/PP_00317LF.2/2025-02-11
Cristina Andres, Alejandra Gonzalez Sanchez, Ignasi Prats, Karen Garcia Comunas, Elena Dima, Maria Carmen Martin, Tomas Pumarola & Andres Anton

Sample details

Collection date
2025-02-11
Country
Spain
Admin level 1
Catalonia
GISAID Isolate ID
EPI_ISL_19771921

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-06-30 13:08agonzalezOPEN
Data use terms URL

Lineage

Lineage
B.D.4.1.1

Authors

Author affiliations
Hospital Universitari Vall d'Hebron - Vall d'Hebron Institut de Recerca

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Alignment and QC metrics

Length
15191
Completeness
99.79%
# of SNPs
108
# of inserted bases
1
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
hRSV/B/Spain/CT-HUVC320262/2025
Submitting group
Date submitted
2025-07-08 12:27:45 UTC
Date released
2025-07-08 12:35:09 UTC
Earliest release date
2025-06-30

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G27A
  • A243G
  • T281C
  • G579A
  • T655C
  • C767T
  • T871C
  • C883T
  • G1385A
  • G1801A
  • T1846C
  • T2176C
  • C2198T
  • C2260T
  • T2898C
  • C3003T
  • C3067T
  • C3082T
    • Deletions
    None
    Insertions
    ins_5610:A

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:N105S

    • G

  • G:A74V
  • G:I118T
  • G:T131A
  • G:I137T
  • G:N144Y
  • G:L217P
  • G:T220A
  • G:I227T
  • G:T253A
  • G:K256E
  • G:I268T
  • G:A269V
  • G:Y285H

    • L

  • L:H1599R

    • M2-1

  • M2-1:S142N

    • M2-2

  • M2-2:I2T
  • M2-2:I36T

    • N

  • N:V97I

    • NS1

  • NS1:S63G
    • Deletions
    None
    Insertions
    None

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