PP_003140R.2

Display Name: Spain/PP_003140R.2/2025-02-11
Cristina Andres, Alejandra Gonzalez Sanchez, Ignasi Prats, Karen Garcia Comunas, Elena Dima, Maria Carmen Martin, Tomas Pumarola & Andres Anton

Sample details

Collection date
2025-02-11
Country
Spain
Admin level 1
Catalonia
GISAID Isolate ID
EPI_ISL_19771922

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-06-30 13:08agonzalezOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

Authors

Author affiliations
Hospital Universitari Vall d'Hebron - Vall d'Hebron Institut de Recerca

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Alignment and QC metrics

Length
15206
Completeness
99.86%
# of SNPs
138
# of inserted bases
6
# of deleted bases
1
# of ambiguous bases
0
# of unknown bases
1
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
hRSV/B/Spain/CT-HUJO063028/2025
Submitting group
Date submitted
2025-07-08 12:27:45 UTC
Date released
2025-07-08 12:35:09 UTC
Earliest release date
2025-06-30

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • T490C
  • G513T
  • T520C
  • T530C
  • G579A
  • C998A
  • G1385A
  • C1717T
  • G1732A
  • T1846C
  • G2029A
  • C2074T
  • C2198T
  • C2245T
  • C2554T
  • C2691T
  • C2707T
  • G2883A
    • Deletions
    4586
    Insertions
    ins_2284:A, ins_3201:A, ins_15092:ATAT

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:S190N
  • F:S211N
  • F:S389P

    • G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P140L
  • G:P214S
  • G:P221L
  • G:I227T
  • G:I252T
  • G:K256N
  • G:I268T
  • G:S275P
  • G:Y285H
  • G:*311Q

    • L

  • L:K570R
  • L:N839S
  • L:R1759K
  • L:T1987I

    • M2-1

  • M2-1:S142N

    • M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

    • N

  • N:V97I
    • Deletions
    None
    Insertions
    None

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