PP_00310NJ.2

Display Name: Spain/PP_00310NJ.2/2025-03-13
Cristina Andres, Alejandra Gonzalez Sanchez, Ignasi Prats, Karen Garcia Comunas, Elena Dima, Maria Carmen Martin, Tomas Pumarola & Andres Anton

Sample details

Collection date
2025-03-13
Country
Spain
Admin level 1
Catalonia
GISAID Isolate ID
EPI_ISL_19789117

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-06-30 13:08agonzalezOPEN
Data use terms URL

Lineage

Lineage
B.D.4.1.1

Authors

Author affiliations
Hospital Universitari Vall d'Hebron - Vall d'Hebron Institut de Recerca

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Alignment and QC metrics

Length
15201
Completeness
99.85%
# of SNPs
149
# of inserted bases
4
# of deleted bases
2
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
hRSV/B/Spain/CT-HUAV-320642/2025
Submitting group
Date submitted
2025-07-08 12:27:45 UTC
Date released
2025-07-08 12:35:09 UTC
Earliest release date
2025-06-30

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G27A
  • C38T
  • C212T
  • T449C
  • G513T
  • C564T
  • G579A
  • T592C
  • T707C
  • G955A
  • T1011C
  • G1012A
  • G1025A
  • A1027T
  • G1385A
  • C1714A
  • G1732A
  • T1846C
    • Deletions
    973, 4586
    Insertions
    ins_15092:ATAT

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:S190N
  • F:R209Q
  • F:S211N

    • G

  • G:A74V
  • G:K85E
  • G:I87T
  • G:Y90H
  • G:S100G
  • G:T130A
  • G:T131A
  • G:I137T
  • G:T139I
  • G:P214S
  • G:P221L
  • G:P229S
  • G:R240G
  • G:S243I
  • G:Q246R
  • G:T253A
  • G:K276R
  • G:A301T

    • L

  • L:I392V
  • L:K570R
  • L:S610P
  • L:R1759K
  • L:A1807T
  • L:T1987I

    • M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:C49F

    • N

  • N:V97I

    • P

  • P:T60A
  • P:T72A
    • Deletions
    None
    Insertions
    None

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