PP_00310ML.2

Display Name: Spain/PP_00310ML.2/2025-03-13
Cristina Andres, Alejandra Gonzalez Sanchez, Ignasi Prats, Karen Garcia Comunas, Elena Dima, Maria Carmen Martin, Tomas Pumarola & Andres Anton

Sample details

Collection date
2025-03-13
Country
Spain
Admin level 1
Catalonia
GISAID Isolate ID
EPI_ISL_19877642

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-06-30 13:08agonzalezOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

Authors

Author affiliations
Hospital Universitari Vall d'Hebron - Vall d'Hebron Institut de Recerca

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Alignment and QC metrics

Length
11342
Completeness
74.48%
# of SNPs
105
# of inserted bases
6
# of deleted bases
1
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
hRSV/B/Spain/CT-HUAV320641/2025
Submitting group
Date submitted
2025-07-08 12:27:45 UTC
Date released
2025-07-08 12:35:09 UTC
Earliest release date
2025-06-30

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • C3903T
  • G4008A
  • A4061G
  • C4064T
  • G4129A
  • A4206T
  • C4483T
  • C4485T
  • C4490T
  • G4494A
  • C4495T
  • T4824C
  • C4866T
  • A4943G
  • C4966T
  • A4969T
  • A5036G
  • T5055C
    • Deletions
    4586
    Insertions
    ins_15092:ATATAT

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:R42K
  • F:S190N
  • F:S211N
  • F:S389P

    • G

  • G:I60T
  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:F166Y
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:S265P
  • G:I268T
  • G:S275P
  • G:Y285H

    • L

  • L:K570R
  • L:R1759K
  • L:V1965I
  • L:T1987I

    • M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F
    • Deletions
    None
    Insertions
    None

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