PP_0030BCW.2

Display Name: Spain/PP_0030BCW.2/2025-01-14
Cristina Andres, Alejandra Gonzalez Sanchez, Ignasi Prats, Karen Garcia Comunas, Elena Dima, Maria Carmen Martin, Tomas Pumarola & Andres Anton

Sample details

Collection date
2025-01-14
Country
Spain
Admin level 1
Catalonia
GISAID Isolate ID
EPI_ISL_19709591

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-06-30 12:59agonzalezOPEN
Data use terms URL

Lineage

Lineage
A.D.3.1

Authors

Author affiliations
Hospital Universitari Vall d'Hebron - Vall d'Hebron Institut de Recerca

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Alignment and QC metrics

Length
15198
Completeness
99.83%
# of SNPs
243
# of inserted bases
1
# of deleted bases
2
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
hRSV/A/Spain/CT-HUAV316305/2025
Submitting group
Date submitted
2025-07-08 12:21:40 UTC
Date released
2025-07-08 12:23:46 UTC
Earliest release date
2025-06-30

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T66A
  • A67G
  • C90T
  • A449G
  • T497C
  • G587T
  • C691T
  • G817A
  • T844A
  • C871T
  • T988C
  • T989C
  • C999T
  • G1000A
  • C1012T
  • G1034A
  • G1050A
  • G1077A
    • Deletions
    4175, 4592
    Insertions
    ins_3154:A

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    F

  • F:L20F
  • F:F22I
  • F:K65R
  • F:S276N

    • G

  • G:H90Y
  • G:L101S
  • G:T113I
  • G:V131D
  • G:I133T
  • G:I134K
  • G:R151H
  • G:N178G
  • G:G224E
  • G:V225A
  • G:P230T
  • G:S243I
  • G:T249I
  • G:S250F
  • G:H258Q
  • G:K262E
  • G:E263K
  • G:I265L

    • L

  • L:P171L
  • L:R256K
  • L:Y598H
  • L:L835M
  • L:T1082N
  • L:L1438Q
  • L:N1723S
  • L:E1725G
  • L:G1731D

    • M2-1

  • M2-1:K113R
  • M2-1:S176P

    • M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:I46L
  • M2-2:T77A

    • N

  • N:V352A

    • NS1

  • NS1:N127S

    • P

  • P:L55P
  • P:T92M

    • SH

  • SH:T26I
    • Deletions
    None
    Insertions
    None

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