PP_002YQ51.1

Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.
Display Name: Argentina/PP_002YQ51.1/2024-08-29
Dolores Acuna, Maria Juliana Palau, Analia Vera, Cecilia Marta Vescina, Natalia Pamela Trevino, Maria Paula Eguiguren, Guadalupe Fernandez Gago, Alejandra Alancay, Victoria Nadalich, Andres Angeletti, Andres Cordero, Matias Irazoqui & Mariana Viegas

Sample details

Collection date
2024-08-29
Country
Argentina

Data use terms

Data use terms
RESTRICTED

Data use terms history

ChangedUserData use terms
2025-06-09 16:31doloacuRESTRICTED until 2026-06-09
Data use terms URL

Lineage

Lineage
B.D.E.1

Host

Host name - scientific
Human

Sequencing

Sequencing instrument
MinIon
Sequencing protocol
Rapid Barcoding Kit; Oxford Nanopore

Alignment and QC metrics

Length
15222
Completeness
100.00%
# of SNPs
131
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
HRSV/B/Argentina/PAIS-HSML/62/2024-08-29
Submitting group
Date submitted
2025-06-09 16:31:44 UTC
Date released
2025-06-09 16:32:29 UTC
Earliest release date
2025-06-09

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • T33C
  • T48C
  • T144C
  • C212T
  • T357C
  • A386G
  • G434A
  • G513T
  • G579A
  • C998A
  • T1273C
  • G1385A
  • C1672T
  • G1732A
  • T1846C
  • A2059T
  • C2074T
  • C2198T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:S190N
  • F:S211N
  • F:S389P

    • G

  • G:A74V
  • G:V94I
  • G:E97D
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P152L
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:I268T
  • G:A269V
  • G:S275P
  • G:Y285H

    • L

  • L:S173L
  • L:K570R
  • L:V715I
  • L:N1652I
  • L:R1759K
  • L:S1931N
  • L:T1987I

    • M2-2

  • M2-2:I2T
  • M2-2:D35N
  • M2-2:C49F

    • N

  • N:V97I

    • NS1

  • NS1:Y30H
  • NS1:M126I

    • SH

  • SH:I49T
    • Deletions
    None
    Insertions
    None

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