PP_002YQ43.1

Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.
Display Name: Argentina/PP_002YQ43.1/2024-08-07
Dolores Acuna, Maria Juliana Palau, Analia Vera, Cecilia Marta Vescina, Natalia Pamela Trevino, Maria Paula Eguiguren, Guadalupe Fernandez Gago, Alejandra Alancay, Victoria Nadalich, Andres Angeletti, Andres Cordero, Matias Irazoqui & Mariana Viegas

Sample details

Collection date
2024-08-07
Country
Argentina

Data use terms

Data use terms
RESTRICTED

Data use terms history

ChangedUserData use terms
2025-06-09 16:31doloacuRESTRICTED until 2026-06-09
Data use terms URL

Lineage

Lineage
B.D.E.1

Host

Host name - scientific
Human

Sequencing

Sequencing instrument
MinIon
Sequencing protocol
Rapid Barcoding Kit; Oxford Nanopore

Alignment and QC metrics

Length
15222
Completeness
99.91%
# of SNPs
138
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
13
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
HRSV/B/Argentina/PAIS-HSML/58/2024-08-07
Submitting group
Date submitted
2025-06-09 16:31:44 UTC
Date released
2025-06-09 16:32:29 UTC
Earliest release date
2025-06-09

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • T330C
  • A404G
  • G513T
  • G579A
  • T928C
  • C1000A
  • C1008T
  • A1315G
  • G1385A
  • G1732A
  • G1768A
  • T1846C
  • C2074T
  • C2198T
  • A2491G
  • C2554T
  • C2655T
  • C2691T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:F12I
  • F:S190N
  • F:S211N
  • F:S389P

    • G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P150S
  • G:P214S
  • G:P221L
  • G:E239G
  • G:I252T
  • G:I268T
  • G:S275P
  • G:Y285H

    • L

  • L:S169P
  • L:K570R
  • L:S610P
  • L:A1489T
  • L:M1741L
  • L:N1747D
  • L:R1759K
  • L:N1916G
  • L:T1987I
  • L:L2121F
  • L:L2162H
  • L:E2165V

    • M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

    • N

  • N:V97I

    • P

  • P:I63V
    • Deletions
    None
    Insertions
    None

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