PP_002YPVM.1

Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.
Display Name: Argentina/PP_002YPVM.1/2024-07-10
Dolores Acuna, Maria Juliana Palau, Analia Vera, Cecilia Marta Vescina, Natalia Pamela Trevino, Maria Paula Eguiguren, Guadalupe Fernandez Gago, Alejandra Alancay, Victoria Nadalich, Andres Angeletti, Andres Cordero, Matias Irazoqui & Mariana Viegas

Sample details

Collection date
2024-07-10
Country
Argentina

Data use terms

Data use terms
RESTRICTED

Data use terms history

ChangedUserData use terms
2025-06-09 16:31doloacuRESTRICTED until 2026-06-09
Data use terms URL

Lineage

Lineage
B.D.E.1

Host

Host name - scientific
Human

Sequencing

Sequencing instrument
MinIon
Sequencing protocol
Rapid Barcoding Kit; Oxford Nanopore

Alignment and QC metrics

Length
15210
Completeness
99.92%
# of SNPs
152
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
HRSV/B/Argentina/PAIS-HSML/36/2024-07-10
Submitting group
Date submitted
2025-06-09 16:31:44 UTC
Date released
2025-06-09 16:32:29 UTC
Earliest release date
2025-06-09

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • T221A
  • C263T
  • T428C
  • G513T
  • G579A
  • T925C
  • C983T
  • C998A
  • G1385A
  • A1408T
  • T1607C
  • G1732A
  • A1789G
  • T1846C
  • C2074T
  • C2198T
  • T2406C
  • C2554T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:H6Y
  • F:S190N
  • F:S211N
  • F:S389P

    • G

  • G:A74V
  • G:I87T
  • G:S100G
  • G:P109L
  • G:T131A
  • G:I137T
  • G:P150T
  • G:P214S
  • G:P221L
  • G:T242I
  • G:I252T
  • G:K256N
  • G:I268T
  • G:S275L
  • G:Y285H

    • L

  • L:I232T
  • L:K570R
  • L:N1113D
  • L:V1533A
  • L:E1714K
  • L:T1755A
  • L:R1759K
  • L:V1965I
  • L:T1987I
  • L:D2111N

    • M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:H41Y
  • M2-2:N46D
  • M2-2:C49F

    • N

  • N:V97I

    • SH

  • SH:H47R
    • Deletions
    None
    Insertions
    None

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