PP_002YPJ9.1

Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.
Display Name: Argentina/PP_002YPJ9.1/2022-07-04
Dolores Acuna, Mercedes S. Nabaes Jodar, Stephanie Goya, Alicia S. Mistchenko, Angela Gentile & Mariana Viegas

Sample details

Collection date
2022-07-04
Country
Argentina

Data use terms

Data use terms
RESTRICTED

Data use terms history

ChangedUserData use terms
2025-06-09 16:31doloacuRESTRICTED until 2026-06-09
Data use terms URL

Lineage

Lineage
B.D.4.1.1

Host

Host name - scientific
Human

Sequencing

Sequencing instrument
NextSeq550
Sequencing protocol
Nextera XT; Illumina

Alignment and QC metrics

Length
15166
Completeness
99.61%
# of SNPs
100
# of inserted bases
3
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
HRSV/B/Argentina/PAIS-HNRG/459/2022-07-04
Submitting group
Date submitted
2025-06-09 16:31:44 UTC
Date released
2025-06-09 16:32:29 UTC
Earliest release date
2025-06-09

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • T48A
  • G120A
  • C413T
  • T449C
  • T461C
  • T519C
  • G579A
  • G709A
  • C962T
  • T1011C
  • C1038T
  • A1057G
  • T1303C
  • G1385A
  • T1742C
  • T1846C
  • T1903C
  • G2180A
    • Deletions
    None
    Insertions
    ins_3204:GAA

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:I119F

    • G

  • G:A74V
  • G:N114K
  • G:I227T
  • G:I252T
  • G:S265P
  • G:I268T
  • G:L270P

    • L

  • L:N37S
  • L:T263I
  • L:S840T

    • M2-2

  • M2-2:I2T
  • M2-2:I22V

    • N

  • N:V97I
  • N:Y216H
  • N:V362I

    • NS1

  • NS1:V22I

    • P

  • P:P73S
    • Deletions
    None
    Insertions
    None

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