PP_002YNTS.1

Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.
Display Name: Argentina/PP_002YNTS.1/2018-06-26
Dolores Acuna, Mercedes S. Nabaes Jodar, Stephanie Goya, Alicia S. Mistchenko, Angela Gentile & Mariana Viegas

Sample details

Collection date
2018-06-26
Country
Argentina

Data use terms

Data use terms
RESTRICTED

Data use terms history

ChangedUserData use terms
2025-06-09 16:31doloacuRESTRICTED until 2026-06-09
Data use terms URL

Lineage

Lineage
B.D.4.1.1

Host

Host name - scientific
Human

Sequencing

Sequencing instrument
NextSeq550
Sequencing protocol
Nextera XT; Illumina

Alignment and QC metrics

Length
15162
Completeness
77.68%
# of SNPs
66
# of inserted bases
0
# of deleted bases
1
# of ambiguous bases
0
# of unknown bases
3338
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
HRSV/B/Argentina/PAIS-HNRG/414/2018-06-26
Submitting group
Date submitted
2025-06-09 16:31:44 UTC
Date released
2025-06-09 16:32:29 UTC
Earliest release date
2025-06-09

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • C116T
  • G513T
  • G579A
  • C604T
  • T655C
  • T1123C
  • A1132G
  • A1336T
  • G1385A
  • T1846C
  • C2198T
  • T2781C
  • G2787A
  • C3058A
  • C3067T
  • C3082T
  • C3146T
  • C3180T
    • Deletions
    4586
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:F12L
  • F:S276N
  • F:E463D

    • G

  • G:A74V
  • G:T131A
  • G:I137T
  • G:S247T
  • G:K276N
  • G:S309P
  • G:I310T

    • L

  • L:I1601V
  • L:I1837V
  • L:T1987I

    • N

  • N:V97I
    • Deletions
    None
    Insertions
    None

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