PP_002YNQY.1

Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.
Display Name: Argentina/PP_002YNQY.1/2018-06-14
Dolores Acuna, Mercedes S. Nabaes Jodar, Stephanie Goya, Alicia S. Mistchenko, Angela Gentile & Mariana Viegas

Sample details

Collection date
2018-06-14
Country
Argentina

Data use terms

Data use terms
RESTRICTED

Data use terms history

ChangedUserData use terms
2025-06-09 16:31doloacuRESTRICTED until 2026-06-09
Data use terms URL

Lineage

Lineage
B.D.4.1.1

Host

Host name - scientific
Human

Sequencing

Sequencing instrument
NextSeq550
Sequencing protocol
Nextera XT; Illumina

Alignment and QC metrics

Length
15162
Completeness
99.61%
# of SNPs
81
# of inserted bases
0
# of deleted bases
1
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
1
Stop Codons
G:307

Submission details

Submission ID
HRSV/B/Argentina/PAIS-HNRG/410/2018-06-14
Submitting group
Date submitted
2025-06-09 16:31:44 UTC
Date released
2025-06-09 16:32:29 UTC
Earliest release date
2025-06-09

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • A209G
  • G513T
  • G579A
  • A1282T
  • G1385A
  • T1846C
  • T2047C
  • C2198T
  • T2388C
  • T2517C
  • C3067T
  • C3082T
  • C3103T
  • C3146T
  • C3169T
  • C3180T
  • A3735G
  • T3936C
    • Deletions
    4586
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    G

  • G:A74V
  • G:T131A
  • G:G135S
  • G:I137T
  • G:P170S
  • G:I268T
  • G:L270P
  • G:S307*
  • G:I310T

    • L

  • L:I487V
  • L:T1987I

    • M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:E80D

    • N

  • N:V97I

    • SH

  • SH:E56V
    • Deletions
    None
    Insertions
    None

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