PP_002YNM4.1

Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.
Display Name: Argentina/PP_002YNM4.1/2018-06-05
Dolores Acuna, Mercedes S. Nabaes Jodar, Stephanie Goya, Alicia S. Mistchenko, Angela Gentile & Mariana Viegas

Sample details

Collection date
2018-06-05
Country
Argentina

Data use terms

Data use terms
RESTRICTED

Data use terms history

ChangedUserData use terms
2025-06-09 16:31doloacuRESTRICTED until 2026-06-09
Data use terms URL

Lineage

Lineage
B.D.4.1.1

Host

Host name - scientific
Human

Sequencing

Sequencing instrument
NextSeq550
Sequencing protocol
Nextera XT; Illumina

Alignment and QC metrics

Length
15163
Completeness
99.61%
# of SNPs
38
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
HRSV/B/Argentina/PAIS-HNRG/407/2018-06-05
Submitting group
Date submitted
2025-06-09 16:31:44 UTC
Date released
2025-06-09 16:32:29 UTC
Earliest release date
2025-06-09

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G579A
  • A619G
  • T660C
  • A1057G
  • G1385A
  • T1846C
  • A1936G
  • C2198T
  • C3067T
  • C3082T
  • C3146T
  • C3180T
  • A4090G
  • A4502G
  • C4866T
  • A5221C
  • T5287C
  • C5379T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:R209L

    • G

  • G:A74V
  • G:P245L

    • L

  • L:V1248I
  • L:A2119V

    • M2-2

  • M2-2:I2T

    • N

  • N:V97I

    • NS2

  • NS2:I26T
    • Deletions
    None
    Insertions
    None

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