PP_002YMYH.1

Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.
Display Name: Argentina/PP_002YMYH.1/2024-06-12
Dolores Acuna, Gretel Paula Wenk, Luciana Montoto Piazza, Vivian Bokser, Lourdes Dominguez Figueredo, Emilce Haleblian, Laura Mino, Eugenia Sevilla, Alejandra Svartz, Victoria Nadalich, Andres Angeletti, Andres Cordero, Matias Irazoqui & Mariana Viegas

Sample details

Collection date
2024-06-12
Country
Argentina

Data use terms

Data use terms
RESTRICTED

Data use terms history

ChangedUserData use terms
2025-06-09 16:31doloacuRESTRICTED until 2026-06-09
Data use terms URL

Lineage

Lineage
B.D.4.1.1

Host

Host name - scientific
Human

Sequencing

Sequencing instrument
MinIon
Sequencing protocol
Rapid Barcoding Kit; Oxford Nanopore

Alignment and QC metrics

Length
15222
Completeness
100.00%
# of SNPs
117
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
HRSV/B/Argentina/PAIS-ELZ/80/2024-06-12
Submitting group
Date submitted
2025-06-09 16:31:44 UTC
Date released
2025-06-09 16:32:29 UTC
Earliest release date
2025-06-09

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G86A
  • C116T
  • C254T
  • G579A
  • C706T
  • A748G
  • A827T
  • G1385A
  • T1846C
  • T1990A
  • C2167T
  • A2197G
  • C2198T
  • C2382T
  • T2517C
  • T2589C
  • A2745T
  • T2784C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:R209L

    • G

  • G:A74V
  • G:S95L
  • G:P109S
  • G:S115L
  • G:P120S
  • G:T122I
  • G:T238I
  • G:D261V
  • G:P289S

    • L

  • L:Q168K
  • L:V1592A
  • L:P1720S
  • L:M1749I

    • M2-2

  • M2-2:I2T
  • M2-2:H41Y

    • N

  • N:V97I

    • NS2

  • NS2:T82S
    • Deletions
    None
    Insertions
    None

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