PP_002YMWM.1

Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.
Display Name: Argentina/PP_002YMWM.1/2024-05-20
Dolores Acuna, Gretel Paula Wenk, Luciana Montoto Piazza, Vivian Bokser, Lourdes Dominguez Figueredo, Emilce Haleblian, Laura Mino, Eugenia Sevilla, Alejandra Svartz, Victoria Nadalich, Andres Angeletti, Andres Cordero, Matias Irazoqui & Mariana Viegas

Sample details

Collection date
2024-05-20
Country
Argentina

Data use terms

Data use terms
RESTRICTED

Data use terms history

ChangedUserData use terms
2025-06-09 16:31doloacuRESTRICTED until 2026-06-09
Data use terms URL

Lineage

Lineage
B.D.E.1

Host

Host name - scientific
Human

Sequencing

Sequencing instrument
MinIon
Sequencing protocol
Rapid Barcoding Kit; Oxford Nanopore

Alignment and QC metrics

Length
15213
Completeness
99.94%
# of SNPs
142
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
HRSV/B/Argentina/PAIS-ELZ/76/2024-05-20
Submitting group
Date submitted
2025-06-09 16:31:44 UTC
Date released
2025-06-09 16:32:29 UTC
Earliest release date
2025-06-09

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • T164C
  • C284T
  • G500T
  • G513T
  • G579A
  • T935C
  • G1385A
  • C1429T
  • G1732A
  • G1768A
  • T1846C
  • C2074T
  • C2198T
  • T2346C
  • T2355C
  • C2554T
  • C2691T
  • A2925T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:F12I
  • F:S190N
  • F:S211N
  • F:S389P

    • G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P214S
  • G:T216I
  • G:T220A
  • G:P221L
  • G:I252T
  • G:I268T
  • G:S275P
  • G:T278K
  • G:Y285H
  • G:*311Q

    • L

  • L:I103T
  • L:S169P
  • L:K570R
  • L:T1758I
  • L:R1759K
  • L:T1987I

    • M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F
  • M2-2:P79L

    • N

  • N:V97I

    • NS2

  • NS2:Y118H
    • Deletions
    None
    Insertions
    None

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