PP_002YMVP.1

Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.
Display Name: Argentina/PP_002YMVP.1/2024-05-06
Dolores Acuna, Gretel Paula Wenk, Luciana Montoto Piazza, Vivian Bokser, Lourdes Dominguez Figueredo, Emilce Haleblian, Laura Mino, Eugenia Sevilla, Alejandra Svartz, Victoria Nadalich, Andres Angeletti, Andres Cordero, Matias Irazoqui & Mariana Viegas

Sample details

Collection date
2024-05-06
Country
Argentina

Data use terms

Data use terms
RESTRICTED

Data use terms history

ChangedUserData use terms
2025-06-09 16:31doloacuRESTRICTED until 2026-06-09
Data use terms URL

Lineage

Lineage
B.D.E.5

Host

Host name - scientific
Human

Sequencing

Sequencing instrument
MinIon
Sequencing protocol
Rapid Barcoding Kit; Oxford Nanopore

Alignment and QC metrics

Length
15211
Completeness
99.93%
# of SNPs
123
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
HRSV/B/Argentina/PAIS-ELZ/73/2024-05-06
Submitting group
Date submitted
2025-06-09 16:31:44 UTC
Date released
2025-06-09 16:32:29 UTC
Earliest release date
2025-06-09

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • A23G
  • C212T
  • C405T
  • T470C
  • G513T
  • G579A
  • T612C
  • C767T
  • T775C
  • T808C
  • C829T
  • T833C
  • T835C
  • C883T
  • G955A
  • C1231T
  • G1385A
  • A1414G
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:S211N
  • F:K327N
  • F:L467F
  • F:A529V

    • G

  • G:A10S
  • G:A74V
  • G:S95P
  • G:R98K
  • G:P101S
  • G:A107T
  • G:I118T
  • G:T129K
  • G:P229L
  • G:V249A
  • G:I252T

    • L

  • L:S100F
  • L:T1987I

    • M2-1

  • M2-1:N121S

    • M2-2

  • M2-2:I2T

    • N

  • N:V97I

    • NS2

  • NS2:M10T
  • NS2:Y84H

    • P

  • P:P73S
  • P:P80S
    • Deletions
    None
    Insertions
    None

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