PP_002YML7.1

Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.
Display Name: Argentina/PP_002YML7.1/2022-06-23
Dolores Acuna, Gretel Paula Wenk, Luciana Montoto Piazza, Vivian Bokser, Lourdes Dominguez Figueredo, Emilce Haleblian, Laura Mino, Eugenia Sevilla, Alejandra Svartz, Victoria Nadalich, Andres Angeletti, Andres Cordero, Matias Irazoqui & Mariana Viegas

Sample details

Collection date
2022-06-23
Country
Argentina

Data use terms

Data use terms
RESTRICTED

Data use terms history

ChangedUserData use terms
2025-06-09 16:31doloacuRESTRICTED until 2026-06-09
Data use terms URL

Lineage

Lineage
B.D.E.1

Host

Host name - scientific
Human

Sequencing

Sequencing instrument
NextSeq550
Sequencing protocol
Nextera XT; Illumina

Alignment and QC metrics

Length
15165
Completeness
79.11%
# of SNPs
104
# of inserted bases
4
# of deleted bases
2
# of ambiguous bases
0
# of unknown bases
3121
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
HRSV/B/Argentina/PAIS-ELZ/44/2022-06-23
Submitting group
Date submitted
2025-06-09 16:31:44 UTC
Date released
2025-06-09 16:32:29 UTC
Earliest release date
2025-06-09

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G513T
  • G579A
  • T724C
  • T726C
  • T758C
  • T999C
  • T1207C
  • T1294C
  • T1316C
  • T1372C
  • T1384C
  • G1385A
  • G1732A
  • G1768A
  • T1846C
  • C2074T
  • C2198T
  • C2227T
    • Deletions
    973, 4586
    Insertions
    ins_15092:ATAT

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:F12I
  • F:S190N
  • F:S211N
  • F:S389P

    • G

  • G:A74V
  • G:S100G
  • G:P101S
  • G:T131A
  • G:I137T
  • G:P150L
  • G:P214S
  • G:L217P
  • G:P221L
  • G:I252T
  • G:I268T
  • G:S275P
  • G:Q280K
  • G:Y285H

    • L

  • L:G850S
  • L:R1759K
  • L:T1987I

    • M

  • M:S86N

    • N

  • N:V97I

    • NS2

  • NS2:I48T
  • NS2:F59L

    • P

  • P:K52R
  • P:T60A
    • Deletions
    None
    Insertions
    None

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