accessionVersion	accession	version	submissionId	isRevocation	submitter	groupName	groupId	submittedAtTimestamp	submittedDate	releasedAtTimestamp	releasedDate	dataUseTerms	dataUseTermsRestrictedUntil	dataBecameOpenAt	dataUseTermsUrl	versionStatus	versionComment	pipelineVersion	ampliconPcrPrimerScheme	ampliconSize	anatomicalMaterial	anatomicalPart	assemblyReferenceGenomeAccession	authorAffiliations	authors	bioprojectAccession	biosampleAccession	bodyProduct	breadthOfCoverage	cellLine	collectionDevice	collectionMethod	comment	completeness	consensusSequenceSoftwareName	consensusSequenceSoftwareVersion	cultureId	dehostingMethod	depthOfCoverage	diagnosticMeasurementMethod	diagnosticMeasurementUnit	diagnosticMeasurementValue	diagnosticTargetGeneName	diagnosticTargetPresence	displayName	earliestReleaseDate	environmentalMaterial	environmentalSite	experimentalSpecimenRoleType	exposureDetails	exposureEvent	exposureSetting	foodProduct	foodProductProperties	frameShifts	gcaAccession	geoLocAdmin1	geoLocAdmin2	geoLocCity	geoLocCountry	geoLocLatitude	geoLocLongitude	geoLocSite	gisaidIsolateId	hostAge	hostAgeBin	hostDisease	hostGender	hostHealthOutcome	hostHealthState	hostNameCommon	hostNameScientific	hostOriginCountry	hostRole	hostTaxonId	hostVaccinationStatus	insdcAccessionBase	insdcAccessionFull	insdcRawReadsAccession	insdcVersion	isLabHost	length	lineage	ncbiReleaseDate	ncbiSourceDb	ncbiSubmitterCountry	ncbiUpdateDate	ncbiVirusName	ncbiVirusTaxId	passageMethod	passageNumber	presamplingActivity	previousInfectionDisease	previousInfectionOrganism	purposeOfSampling	purposeOfSequencing	qualityControlDetails	qualityControlDetermination	qualityControlIssues	qualityControlMethodName	qualityControlMethodVersion	rawSequenceDataProcessingMethod	sampleCollectionDate	sampleCollectionDateRangeLower	sampleCollectionDateRangeUpper	sampleReceivedDate	sampleType	sequencedByContactEmail	sequencedByContactName	sequencedByOrganization	sequencingAssayType	sequencingDate	sequencingInstrument	sequencingProtocol	signsAndSymptoms	specimenCollectorSampleId	specimenProcessing	specimenProcessingDetails	stopCodons	subtype	totalAmbiguousNucs	totalDeletedNucs	totalFrameShifts	totalInsertedNucs	totalSnps	totalStopCodons	totalUnknownNucs	travelHistory
PP_002XFWV.1	PP_002XFWV	1	8VOMZD942D	false	akuznetsov	Clinical Virology, Basel	430	1748259815	2025-05-26	1748260002	2025-05-26	OPEN		2025-05-26	https://pathoplexus.org/about/terms-of-use/open-data	LATEST_VERSION		21	500 bp primers were designed using PRIMAL tool. Additionally, 2000bp-NAT primers and 1000bp-RSV-A and RSV-B subgroup-specific NAT primers were used from Wang et al. (doi: 10.1016/j.jviromet.2021.114335), and used in 2 separate primer pools.	500bp, 1000bp, 2000bp			PP109421.1	Clinical Virology, Laboratory Medicine, University Hospital Basel, Basel, Switzerland; Clinical Virology, Laboratory Medicine, University Hospital Basel, Basel, Switzerland, Transplantation and Clinical Virology, Department of Biomedicine, University of Basel, Basel, Switzerland; Biozentrum, University of Basel, Basel, Switzerland; Biozentrum, University of Basel, Basel, Switzerland	Gosert, Rainer; Leuzinger, Karoline; Kuznetsov, Alexander; Neher, Richard	PRJEB88486	SAMEA118594046		82					0.8324466338259442					18875						Switzerland/PP_002XFWV.1/2024-01	2025-05-26										GCA_965615515.1	Basel-Stadt		Basel	Switzerland	47.56065954497	7.58504484478									human	Homo sapiens		Patient [OMRSE:00000030]	9606	Not Vaccinated [GENEPIO:0100102]	OZ277719	OZ277719.1			false	14806	A.D.1.9																				2024-01	2024-01-01	2024-01-31						whole genome sequencing assay [OBI:0002117]		Illumina MiniSeq [OBI:0003114]	Genomes were generated through amplicon sequencing of 500, 1000, and 2000 bp amplicons in separate primer pools. Libraries were created using KAPA HyperPrep Kit, and sequence data was produced using Illumina MiniSeq							0	2	0	0	177	0	2134